metavizr
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Function reference

version 0.99.5

All functions

Build a MetavizTree object from another object

  • buildMetavizTree
  • buildMetavizTree,MRexperiment-method

Data container for MRexperiment objects

  • EpivizMetagenomicsData
  • EpivizMetagenomicsData-class

Method to select and set aggregation type to nodes in FacetZoom

  • generateSelection

Class managing connection to metaviz application.

  • MetavizApp
  • MetavizApp-class

metavizr settings

  • metavizControl

Taxonomy tree structure wrapper

  • MetavizTree
  • MetavizTree-class

Generic method to register data to the epiviz data server

  • register,MRexperiment-method

Generic method to register data to the epiviz data server

  • register,phyloseq-method

Start metaviz app and create

  • startMetaviz

Start metaviz app in standalone (locally) and create

  • startMetavizStandalone

validate

  • validateObject

Contents

  • All functions

Developed by Hector Corrada Bravo, Florin Chelaru, Justin Wagner, Jayaram Kancherla, Joseph Paulson.

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