Epiviz

Class: MeasurementGenomicDataArrayWrapper

MeasurementGenomicDataArrayWrapper

new epiviz.datatypes.MeasurementGenomicDataArrayWrapper(measurement, items, itemsByGlobalIndex)

datatypes/measurement-genomic-data-array-wrapper.js, line 16
Name Type Description
measurement epiviz.measurements.Measurement
items Array.<epiviz.datatypes.GenomicData.ValueItem>
itemsByGlobalIndex Object.<number, epiviz.datatypes.GenomicData.ValueItem>

Methods

binarySearchStarts(range){Object}

datatypes/measurement-genomic-data-array-wrapper.js, line 102

TODO: Test to check correctness Gets the first index and length of the rows that have start positions within the given range

.

TODO: Test to check correctness Gets the first index and length of the rows that have start positions within the given range

Name Type Description
range epiviz.datatypes.GenomicRange
Returns:
Type Description
Object

get(index){epiviz.datatypes.GenomicData.ValueItem}

datatypes/measurement-genomic-data-array-wrapper.js, line 40
Name Type Description
index number
Returns:
Type Description
epiviz.datatypes.GenomicData.ValueItem

getByGlobalIndex(globalIndex){epiviz.datatypes.GenomicData.ValueItem}

datatypes/measurement-genomic-data-array-wrapper.js, line 84
Name Type Description
globalIndex number
Returns:
Type Description
epiviz.datatypes.GenomicData.ValueItem

getRow(index){epiviz.datatypes.GenomicData.RowItem}

datatypes/measurement-genomic-data-array-wrapper.js, line 48
Name Type Description
index number
Returns:
Type Description
epiviz.datatypes.GenomicData.RowItem

getRowByGlobalIndex(globalIndex){epiviz.datatypes.GenomicData.RowItem}

datatypes/measurement-genomic-data-array-wrapper.js, line 92
Name Type Description
globalIndex number
Returns:
Type Description
epiviz.datatypes.GenomicData.RowItem

globalEndIndex(){number}

datatypes/measurement-genomic-data-array-wrapper.js, line 69
Returns:
Type Description
number

globalStartIndex(){number}

datatypes/measurement-genomic-data-array-wrapper.js, line 62
Returns:
Type Description
number

measurement(){epiviz.measurements.Measurement}

datatypes/measurement-genomic-data-array-wrapper.js, line 55
Returns:
Type Description
epiviz.measurements.Measurement

size(){number}

datatypes/measurement-genomic-data-array-wrapper.js, line 76
Returns:
Type Description
number
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